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OPTSIL: Optimal sequence clustering for taxonomic purposes, data extraction from GenBank flatfiles, etc.
Jan 1, 2006 · In order to facilitate and to harmonize taxonomic decisions in a field in which the Biological Species Concept does not apply, an arbitrary and artificial definition has evolved …
The major ranks: domain, kingdom, phylum, class, order, family, genus, and species, applied to the red fox, Vulpes vulpes. In biological taxonomy, taxonomic rank (which some authors prefer …
The prime examples are the deeply branching lineages of the Clostridium - Bacillus subline of Gram-positive bacteria, e.g., Clostridium, Eubacterium, Ruminococcus, Peptococcus, and …
This chapter describes the main principles underlying the delineation of the higher ranks (phylum-class-order-family) and discusses the finding that not all taxa related at the same rank are …
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat Commun 10: 2182. R Riley, S Haridas, KH Wolfe, MR Lopes, CT Hittinger, M Göker, ... M …
Phylogeny, the history of the evolution of a species or group, especially in reference to lines of descent and relationships among broad groups of organisms. Fundamental to phylogeny is the …
Apr 7, 2025 · names at any taxonomic level (kingdom, phyla, class, order, family, genus, species, and subspec ies) should be
A novel non-motile, Gram-staining-negative, yellow-pigmented bacterium, designated CT348 T, isolated from the ectorhizosphere of an organic olive tree in Spain and characterised as an …
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